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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903426.1_cds_XP_016453473.1_47598
CDS Infomation

[gene=LOC107777837] [db_xref=GeneID:107777837] [protein=CRM-domain containing factor CFM2, chloroplastic-like] [protein_id=XP_016453473.1] [location=join(96966..97679,98374..98869,98945..99075,99206..99511,99595..99751,99836..100128,100902..100961,101053..101184,101946..102215,102314..102545,102892..103022,103111..103335)] [gbkey=CDS]
Sequence

ATGTTGCTTCCTCTCTGCAACTTCCATCCCTTAAACCCTCCCAAAACCCTCCTTTACCCC
TCCCCTTCCCTTCCTTTTTTCTCCACCACACACCCTCTTTCCCTTAAGCCCTTCTTTTCC
CGTTCTTCCATTCCCGTTTTCGCCACTTCCCCTAATAATACTTCACCTTTACCTGAATCC
GCCATTCAAAGAATCGCCAACAAACTCCGCAGCCTCGGCTATATAACCGAAAACCAAGAA
ACAACCCTAGAAGAAAATTCTTTAAGCCCAAATCCCAATTCTTCCTCACCTGGCCAAATT
TTTGTTCCTTTGCCTAACCAATTACCCAAGTATCGTGTGGGTCACACGCTTGACGTCAGT
TGGAGCACGCCCGAAAACCCGGTACCACATCCCGGTTTAGGGAACAGTATACAGAAGTTT
CATGAACTGAGGAGTAATTTTTTAAAGGAGAAGGAGAAAGAAAGGCTGAAGAATAAGGAT
AATAAGAAAGAGAGAGCGCCTAGCTTAGCTGAACTGACTTTGCCAGCTGAAGAGTTGAGG
AGGCTGAGGACACTTGGGATTGGGTTAAGGAAAAAATTGAAGATAGGTAAAGCTGGGATT
ACTGAGGGGATTGTGAATGGTATTCATGAAAGATGGAGGCGTATCGAGCTCGTTAAGATT
ACCTGTGAGGACCTGTGTAGGTTGAATATGAAGAGGACTCATGAGTTATTAGAGAGGAAA
ACTGGAGGTTTGGTTATCTGGAGATCTGGAAGTAATATAATTCTGTATAGAGGAGCTGAT
TACAAGTATCCTTATTTCTCCGAGAGTAACAGCGTGCAAGATGCTAGTCCTGACTTGTTC
ACGGGTACGGAAGAGCATATGACTAATTCATCTGACATGGATGCCATAAAATCTGATGCA
TCGGACAGAAAGTCTCCTACACGCGTAATCCAGGGTGTAGGTTCTCCAGACAGAGTCCGA
TTTCAATTGCCTGGAGAGGCAGAACTTACTGAAGAAGCTGACAAGCTACTGGAAGGACTT
GGCCCTCGCTTTACTGATTGGTGGGGTTGTGAGCCATTGCCTATCGATGCAGATTTTCTG
CCAGCTGTAGTCCCTGGGTACAAGAAACCTTTCCGTCTACTTCCATACGGAGTAAAACCT
AAATTGACAAATGATGAAATGACAACACTGAAAAGACTTGGTCGACCTTTGCCTTGCCAT
TTTGCATTAGGCAGAAACAGAAAACTCCAAGGATTGGCTGCTGCAATTGTGAAGCTTTGG
GAGAAATGTGAAATTGCAAAAGTTGCCGTTAAAAGAGGAGTTCAGAACACTAACAGTGAA
CTGATGGCGGAAGAGCTTAAGTGGTTGACTGGAGGAACCTTGCTCTCTAGAGATAAGGAA
TTTATTGTCTTCTACCGTGGAAAGGACTTCTTGCCATCTGCAGTCTCTTCAGCAATAGCA
GAACGGAGAAAGCAAGTTGTTGAAGAGGAAAAGAAGAGTAGTTTTAGTTCATCAGTGGCA
AATACTAAGGAACGGAAAAAGTCCACAGCGAGAAGTGTTTCTGATGATGAACATGCAAAC
CAAAATGACCAAAAAGGTGTCCACGAAAAAAAAAAACTGACTTCCATGGAAGCAGCTATC
AAGAGAACTGCAGATAAATTAGCCACTGCAATAGAAAAGAAAGCCAAGGCAGAGAAGCTC
CTTGTGGAGCTTGAGGAGGATGAGATGCCACAGCAACCTGATATGGATAAAGAGGGAATA
ACCGAAGAAGAAAGATTCATGTTGCGGAAGATTGGCTTGAGAATGAAGCCTTTCTTACTT
CTTGGTAGGCGGGGAGTCTTTGATGGAACAGTGGAGAACATGCACCTTCATTGGAAATAT
AGGGAGTTGGTAAAGGTAATAACCGGGAGGAAAGGCATTGAAGAGGTAAACCAAATAGCT
AGGATGTTGGAGGCAGAGAGTGGGGGGATACTAGTTGCTGTTGAGCGAGTAAACAAGGGT
TATGCAATCATTGTGTACCGGGGAAAGAACTATGAAAGGCCTGCTTCTTTGAGGCCTCAG
ACTCTTCTAAGTAAAAGAGAAGCAATGAAGCGTTCTATAGAGGCTCAGCGACGTCAGTCG
TTGAAATTGCATGTCTTAAAGCTTGCACAAAATATAGAGGCCTTGAAGTCACGGTTGACC
AAAAGTGAGGAGATGATTCATATTCAGTCCCCAGATATAGTTGGTTTGCAGGTAGCTGAG
ACAGGAACATCTAATGCTGCAGGAGGAACTAATTATCAGTCTAGTTTAGCAAGTCCTTGC
ACTTCTGAGGATTTTGGGGGTGCTGCAAAAGACACTGACCACAGCTCTCAGAAAGAATTA
CCAAGTGATTCCTCAGAAACTGACCACAGTTCTCAGCAAGAATTTCCAAGTGATTCCTCT
TTCCAATATGAAAGCAAGGCTGAGGCTATGTCTGATACAATTCAACCTCAGCATCAATCT
ATTTCATCAACCAAAGAGTCGAAAAGTATGTTCAATGTGAATGTGGATGAAAAAGCATTC
GGAAGTGCAGTCAGTGAATCTGTTTCTAAGTCTTCCAGAGGAGAAGTTAAGATCCACTTT
TCTGAGACCAGAAGTGTCAATAAACTTCGGGAAGTTGACAATAGAAAGGAGGTGTCTGAA
GTTGATTCCGTCAAACCTCAACAAGAACTTAGATCCACCAGGAGTAGGTCCGAAGGGATG
CCTCCAAAAAAAGTACATCTTTCCAACAGAGAGAGGCTGCTTCTCAGAAAACAAGCCCTC
AAGATGAAGCAGCAACCAGTCCTTGCTGTTGGGAGGAGCAATATTGTCACTGGAGTTGCC
AAAGCGATCAAAGCACACTTTAAGAAGTATCCTCTTGCTATTGTGAATGTCAAAGGAAGG
GCAAAAGGGACTTCAGTTAGGGAGGTGGTTTTTAAGCTGGAGCAAGCTACCGGTGCTGTT
CTTGTTTCCCAAGAACCAAGCAAAGTCATATTATATAGGGGCTGGGGACCAGAAGGACAG
CGTGGTGCTTCTAATCGAAATGGTACCGGTTATTCAAGAAACAGCAGAGAGCACAAGGAT
CAGCTGGTGATATCTCCTGAGCTAATATCAGCAATCAGGCTTGAATGTGGTTTGCCGAGC
GACTATGAAATGGAGGTTGCTTCATAG

Peptide Sequence

PEP ID

XP_016453473.1
PEP Infomation

PREDICTED: CRM-domain containing factor CFM2, chloroplastic-like [Nicotiana tabacum]
Sequence

MLLPLCNFHPLNPPKTLLYPSPSLPFFSTTHPLSLKPFFSRSSIPVFATSPNNTSPLPES
AIQRIANKLRSLGYITENQETTLEENSLSPNPNSSSPGQIFVPLPNQLPKYRVGHTLDVS
WSTPENPVPHPGLGNSIQKFHELRSNFLKEKEKERLKNKDNKKERAPSLAELTLPAEELR
RLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDLCRLNMKRTHELLERK
TGGLVIWRSGSNIILYRGADYKYPYFSESNSVQDASPDLFTGTEEHMTNSSDMDAIKSDA
SDRKSPTRVIQGVGSPDRVRFQLPGEAELTEEADKLLEGLGPRFTDWWGCEPLPIDADFL
PAVVPGYKKPFRLLPYGVKPKLTNDEMTTLKRLGRPLPCHFALGRNRKLQGLAAAIVKLW
EKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKEFIVFYRGKDFLPSAVSSAIA
ERRKQVVEEEKKSSFSSSVANTKERKKSTARSVSDDEHANQNDQKGVHEKKKLTSMEAAI
KRTADKLATAIEKKAKAEKLLVELEEDEMPQQPDMDKEGITEEERFMLRKIGLRMKPFLL
LGRRGVFDGTVENMHLHWKYRELVKVITGRKGIEEVNQIARMLEAESGGILVAVERVNKG
YAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLKLAQNIEALKSRLT
KSEEMIHIQSPDIVGLQVAETGTSNAAGGTNYQSSLASPCTSEDFGGAAKDTDHSSQKEL
PSDSSETDHSSQQEFPSDSSFQYESKAEAMSDTIQPQHQSISSTKESKSMFNVNVDEKAF
GSAVSESVSKSSRGEVKIHFSETRSVNKLREVDNRKEVSEVDSVKPQQELRSTRSRSEGM
PPKKVHLSNRERLLLRKQALKMKQQPVLAVGRSNIVTGVAKAIKAHFKKYPLAIVNVKGR
AKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPEGQRGASNRNGTGYSRNSREHKD
QLVISPELISAIRLECGLPSDYEMEVAS

Transcript Sequence

Gene sequence data has not been registered.